CDS

Accession Number TCMCG042C38264
gbkey CDS
Protein Id XP_016470400.1
Location 4177..6630
Gene LOC107792676
GeneID 107792676
Organism Nicotiana tabacum

Protein

Length 817aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016614914.1
Definition PREDICTED: lysine-specific histone demethylase 1 homolog 1-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category Q
Description SWIRM domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11450        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04714        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0016575        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034968        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051568        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAACTTCCGCCGGACATCCGCCGGAAACATCCCCCAACATCAACTCCGGCGAAATTTTCCGACAAGACAACCCCCAAAACGACAATGACAATTCTTCCCCTCCTCAAACGACACCCGAACCTGCCGTTTCAGACTCTCAACCCGACGACCTTCCAGAACCTTCCGAACCGGAAATACCCCCCTCCGAATTACCACCACCGCCCACCGGAAACACCCCACCCCAAGTCAGAAAACGACGCCGTAGAAAACGTTTCTTCACGGACATGATTCCCACCTCAGTTTCCGCCGCCGCCGTCTCCGGCCTCCGTGTTCTCCGCCCCAACCCTAAACCCTCCACCGCATATTCTTACTCCGAGACGGAATTAGCCACCGGTGACGACCTTAATAAGAATCACAATCGCCGGCGAAGGATTTCCGATCTCGCTAAAGAAGTCGACCTTGAAGCCCTAATTGCTATCTCCGTCGGGTTCCCTGTCGATTCCCTTACAGAGGAAGAAATTGAAGCTAATGTAGTTTCCGAAATTGGGGGTGTTGAACAATCTAATTACATTGTCGTACGTAACCACATTCTCGCTCGTTGGCGGTCCAATGTTACTGTTTGGCTCACAAAAGATCATGCTTTGGAGTCCATACGAGCTGAACACAAAAATCTCGTGCATTCTGCTTACACTTTTTTACTACAACATGGGTATATCAATTATGGTGTAGCTCCAGCTATAAAAGAACTGAAATTTAAGACACCAGAAGGGGTTCCGAAAGGGAATGTGATTGTTATTGGGGCAGGGTTATCGGGTTTAGTTGCTGCGAGACAGTTGATTTCGTTAGGGTTTAAAGTTGTGGTTCTTGAAGGAAGGGGTAGACCTGGTGGCAGAGTGAGGAGTAAGAAGATGAGCGGGGGACAAAATGGGGTTGTTGCTGCTGCTGATTTAGGTGGGAGTGTGTTAACTGGAATAAATGGTAATCCGTTAGGTGTTCTGGCGAGGCAGCTAGGCATTCTGCTTCATAAGGTGAGAGATATTTGCCCTTTGTATTTGCCTAATGGTAGAACTGTGAATTCGGATATTGATTCTAAAGTTGAAGCTTCATTTAATAAGTTGTTAGATAGGGTGTGTAAACTTAGGCAGGCAATGTTGGATGAGGTTAAGAGCGTGGATGTTTCGTTAGGTACTGCGTTAGAGACGTTTAGGCATGTGTACAGAGTGGCTGAGGATCCCCAAGAGCAAATGCTTCTGGATTGGCATTTGGCCAATTTGGAGTATGCTAATGCTTCATTGATGTCCAATCTGTCGATGGCGTTTTGGGACCAGGATGATCCTTATGAAATGGGGGGTGATCATTGTTTCATCCCGGGGGGAAATGAGAGGTTAATTCGGGCTTTGGCAGAGGACATTCCTATTTTTTACGATAGGACGGTGGAAAGTGTAAGATATGGTACTGACGGAGTTTTAGTGTATGCTGGTGGGCAGGAATATCGTGGGGATATGGTTCTCTGCACGGTTCCATTGGGAGTGCTGAAGAGGGGTACCATTGAGTTTGTACCCGACCTTCCTCAGCGCAAGAAAGATGCGATTGAGAGATTAGGATTTGGATTGTTGAATAAGGTTGCAATTCTGTTTCCCTACGACTTTTGGGGTGGAGAGATTGATACTTTTGGACACTTGAATGAGGACCCGAATATGAGGGGTGAGTTTTTTCTGTTCTATAGTTATTCTTCGGTTTCAGGTGGACCCCTTCTTATTGCTCTTGTAGCTGGAGAAGCAGCAGTAAAATTTGAAAAGATGTCTCCTCTTGAATCTGTTGGGAGGGTTCTTGAAATTCTGAAGGGAATATTCAGTCCGAAAGGAATTGCTGTTCCCGATCCACTTCAAGCAGTTTGTACGCGTTGGGGACAGGATCAGTTCTGTTATGGTTCTTATTCCTATGTTGCAATTGGAGCCTCAGGGGATGATTATGATATCCTCTCTGAGAGTGTTGGTGGCCGACTTTTCTTTGCAGGTGAAGCAACTAATAAACAGTACCCTGCAACAATGCACGGGGCTTTTCTCAGTGGGATGAGAGAGGCGGCTCACATACTGAGAGTTGCGGATAGAAGGTCAATAGCTCCAGCTGAGAAATCAAATAATTTCAGTCAAGAAAACATTATTGTTGTAGATAAGTTCTTCGAGACTCCAGACCTTAAATTTGGTAGTTTCTCTGTGTTGTATGATCCCATATCAGCTGACCTGGAGTCTAATTGCTTAATACGAGTTGCATTGCAAGGGGAGAAACTTTTATATTTATATTGCCTGATCTCTCGAAGGCTAGTACTGGAGCTAAGCAAATTAGAAGGGGATCTGAGCAGGATACAAATGTTAACACGTGACTTTGGGGTGAAATTGGTTGGTTGGAAGAATTTATCCGCTGCTGCTGGATCTCTAATCACCTCCATCGAATCAGCTAGATCAGTTTGA
Protein:  
METSAGHPPETSPNINSGEIFRQDNPQNDNDNSSPPQTTPEPAVSDSQPDDLPEPSEPEIPPSELPPPPTGNTPPQVRKRRRRKRFFTDMIPTSVSAAAVSGLRVLRPNPKPSTAYSYSETELATGDDLNKNHNRRRRISDLAKEVDLEALIAISVGFPVDSLTEEEIEANVVSEIGGVEQSNYIVVRNHILARWRSNVTVWLTKDHALESIRAEHKNLVHSAYTFLLQHGYINYGVAPAIKELKFKTPEGVPKGNVIVIGAGLSGLVAARQLISLGFKVVVLEGRGRPGGRVRSKKMSGGQNGVVAAADLGGSVLTGINGNPLGVLARQLGILLHKVRDICPLYLPNGRTVNSDIDSKVEASFNKLLDRVCKLRQAMLDEVKSVDVSLGTALETFRHVYRVAEDPQEQMLLDWHLANLEYANASLMSNLSMAFWDQDDPYEMGGDHCFIPGGNERLIRALAEDIPIFYDRTVESVRYGTDGVLVYAGGQEYRGDMVLCTVPLGVLKRGTIEFVPDLPQRKKDAIERLGFGLLNKVAILFPYDFWGGEIDTFGHLNEDPNMRGEFFLFYSYSSVSGGPLLIALVAGEAAVKFEKMSPLESVGRVLEILKGIFSPKGIAVPDPLQAVCTRWGQDQFCYGSYSYVAIGASGDDYDILSESVGGRLFFAGEATNKQYPATMHGAFLSGMREAAHILRVADRRSIAPAEKSNNFSQENIIVVDKFFETPDLKFGSFSVLYDPISADLESNCLIRVALQGEKLLYLYCLISRRLVLELSKLEGDLSRIQMLTRDFGVKLVGWKNLSAAAGSLITSIESARSV